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Authors: Matúš Medo, Michaela Medová
Submitted by
8medom
Why should we attempt to reproduce this paper?
I hope that the evaluation framework introduced in the paper can become used by other researchers working on mutational signatures.
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Authors: Angela I. Renton, Thuy T. Dao, Tom Johnstone, Oren Civier, Ryan P. Sullivan, David J. White, Paris Lyons, Benjamin M. Slade, David F. Abbott, Toluwani J. Amos, Saskia Bollmann, Andy Botting, Megan E. J. Campbell, Jeryn Chang, Thomas G. Close, Monika Dörig, Korbinian Eckstein, Gary F. Egan, Stefanie Evas, Guillaume Flandin, Kelly G. Garner, Marta I. Garrido, Satrajit S. Ghosh, Martin Grignard, Yaroslav O. Halchenko, Anthony J. Hannan, Anibal S. Heinsfeld, Laurentius Huber, Matthew E. Hughes, Jakub R. Kaczmarzyk, Lars Kasper, Levin Kuhlmann, Kexin Lou, Yorguin-Jose Mantilla-Ramos, Jason B. Mattingley, Michael L. Meier, Jo Morris, Akshaiy Narayanan, Franco Pestilli, Aina Puce, Fernanda L. Ribeiro, Nigel C. Rogasch, Chris Rorden, Mark M. Schira, Thomas B. Shaw, Paul F. Sowman, Gershon Spitz, Ashley W. Stewart, Xincheng Ye, Judy D. Zhu, Aswin Narayanan & Steffen Bollmann
Mean reproducibility score:
2.5/10
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Number of reviews:
2
Why should we attempt to reproduce this paper?
We invested a lot of work to make the analyses from the paper reproducible and we are very curious how the documentation could be improved and if people run into any problems.
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Authors: Nicola Calonaci, Alisha Jones, Francesca Cuturello, Michael Sattler, Giovanni Bussi
Why should we attempt to reproduce this paper?
The method is trained on the data that were available, but it is meant to be re-trainable as soon as new data are published. It would be great to be really sure that even someone else will be able to do it. In case we receive any feedback, we would be really happy to improve our Github repository so as to make the reproduction easier!
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Authors: Thorben Fröhlking, Vojtěch Mlýnský, Michal Janeček, Petra Kührová, Miroslav Krepl, Pavel Banáš, Jiří Šponer, Giovanni Bussi
Why should we attempt to reproduce this paper?
We do care about reproducibility. In case we receive any feedback, we would be really happy to improve our Github repository and/or submitted manuscript so as to make the reproduction easier!
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Authors: Vittorio Del Tatto, Paolo Raiteri, Mattia Bernetti, Giovanni Bussi
Why should we attempt to reproduce this paper?
We do care about reproducibility. In case we receive any feedback, we would be really happy to improve our Github repository so as to make the reproduction easier!
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Authors: Atsushi Ebihara, Joel H. Nitta, Yurika Matsumoto, Yuri Fukazawa, Marie Kurihara, Hitomi Yokote, Kaoru Sakuma, Otowa Azakami, Yumiko Hirayama, Ryoko Imaichi
Mean reproducibility score:
10.0/10
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Number of reviews:
1
Why should we attempt to reproduce this paper?
It uses the drake R package that should make reproducibility of R projects much easier (just run make.R and you're done). However, it does depend on very specific package versions, which are provided by the accompanying docker image.
