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  • The Interplay of Time-of-day and Chronotype Results in No General and Robust Cognitive Boost

    Authors: Alodie Rey-Mermet, Nicolas Rothen
    DOI: https://doi.org/10.1525/collabra.88337
    Submitted by areyme      

    Why should we attempt to reproduce this paper?

    In this paper, an R package was used to improve the reproducibility of the analyses. Therefore, it would be good to know to what extent this works. The R package includes the following analyses: (1) data trimming and preparation, (2) descriptive statistics, (3) reliability and correlations, (4) t-tests and Bayesian t-tests, (5) latent-change models (structural equation modeling approach), and (6) multiverse analyses. Furthermore, all deidentified data, experiment codes, research materials, and results are publicly accessible on the Open Science Framework (OSF) at https://osf.io/ngfxv. The study’s design and the analyses were pre-registered on OSF. The preregistration can be accessed at https://osf.io/ tywu7.

  • Droplet impact onto a spring-supported plate: analysis and simulations

    Authors: Michael J. Negus, Matthew R. Moore, James M. Oliver, Radu Cimpeanu
    DOI: https://doi.org/10.1007/s10665-021-10107-5
    Submitted by MNegus      
      Mean reproducibility score:   8.0/10   |   Number of reviews:   1
    Why should we attempt to reproduce this paper?

    The direct numerical simulations (DNS) for this paper were conducted using Basilisk (http://basilisk.fr/). As Basilisk is a free software program written in C, it can be readily installed on any Linux machine, and it should be straightforward to then run the driver code to re-produce the DNS from this paper. Given this, the numerical solutions presented in this paper are a result of many high-fidelity simulations, which each took approximately 24 CPU hours running between 4 to 8 cores. Hence the difficulty in reproducing the results should mainly be in the amount of computational resources it would take, so HPC resources will be required. The DNS in this paper were used to validate the presented analytical solutions, as well as extend the results to a longer timescale. Reproducing these numerical results will build confidence in these results, ensuring that they are independent of the system architecture they were produced on.

  • REMoDNaV: robust eye-movement classification for dynamic stimulation

    Authors: Asim H. Dar, Adina S. Wagner, Michael Hanke
    DOI: https://doi.org/10.3758/s13428-020-01428-x
    Submitted by adswa    
      Mean reproducibility score:   7.6/10   |   Number of reviews:   5
    Why should we attempt to reproduce this paper?

    In theory, reproducing this paper should only require a clone of a public Git repository, and the execution of a Makefile (detailed in the README of the paper repository at https://github.com/psychoinformatics-de/paper-remodnav). We've set up our paper to be dynamically generated, retrieving and installing the relevant data and software automatically, and we've even created a tutorial about it, so that others can reuse the same setup for their work. Nevertheless, we've for example never tried it out across different operating systems - who knows whether it works on Windows? We'd love to share the tips and tricks we found to work, and even more love feedback on how to improve this further.

  • Population structure and phenotypic variation of Sclerotinia sclerotiorum from dry bean (Phaseolus vulgaris) in the United States

    Authors: Kamvar ZN, Amaradasa BS, Jhala R, McCoy S, Steadman JR, Everhart SE
    DOI: 10.7717/peerj.4152
    Submitted by hub-admin    
      Mean reproducibility score:   6.0/10   |   Number of reviews:   1
    Why should we attempt to reproduce this paper?

    This paper is reproduced weekly in a docker container on continuous integration, but it is also set up to work via local installs as well. It would be interesting to see if it's reproducible with a human operator who knows nothing of the project or toolchain.

    Tags: R make Docker
  • Bayesian determination of the effect of a deep eutectic solvent on the structure of lipid monolayers

    Authors: "McCluskey, Andrew R. and Sanchez-Fernandez, Adrian and Edler, Karen J. and Parker, Stephen C. and Jackson, Andrew J. and Campbell, Richard A. and Arnold, Thomas
    DOI: DOI https://doi.org/10.1039/C9CP00203K
    Submitted by hub-admin    
      Mean reproducibility score:   8.5/10   |   Number of reviews:   2
    Why should we attempt to reproduce this paper?

    I believe this represents the only example of a reproducible paper from scattering data collected at Diamond Light Source (UK) and the Institute Laue-Langevin (France)

    Tags: Python make

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