Genomic Response to Vitamin D Supplementation in the Setting of a Randomized, Placebo-Controlled Trial


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Oct. 18, 2021, 7:46 a.m.

Genomic Response to Vitamin D Supplementation in the Setting of a Randomized, Placebo-Controlled Trial

Berlanga-Taylor, A. J., Plant, K., Dahl, A., Lau, E., Hill, M., Sims, D., Heger, A., et al.
Berlanga-Taylor, A. J., Plant, K., Dahl, A., Lau, E., Hill, M., Sims, D., Heger, A., et al. (2018). "Genomic Response to Vitamin D Supplementation in the Setting of a Randomized, Placebo-Controlled Trial." EBioMedicine 31: 133-142.
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Why should we reproduce your paper?
It was a null findings paper that disappointed many people. Could I have made a mistake in the coding?; I'm interested in using it as an example of reproducible research and learning from ReproHack. It's nerve wracking to submit for inspection from others so I also want to overcome that fear and be able to lead my students by example. I'll be available via the Slack group or other forms for communication as suggested by organisers. Please note it's only the gene expression and related data that's available on ArrayExpress.
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Resources

  Paper URL: https://pubmed.ncbi.nlm.nih.gov/29685792/
  Data URL: https://www.ebi.ac.uk/arrayexpress/experiments/E-MTAB-6246/
  Code URL: https://github.com/AntonioJBT/BEST_D
Tags: Python R

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