Investigation into the annotation of protocol sequencing steps in the sequence read archive


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Oct. 18, 2021, 7:46 a.m.

Investigation into the annotation of protocol sequencing steps in the sequence read archive

Alnasir, Jamie, and Hugh P. Shanahan.
Alnasir, Jamie, and Hugh P. Shanahan. "Investigation into the annotation of protocol sequencing steps in the sequence read archive." Gigascience 4.1 (2015): s13742-015.
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Metadata annotation is key to reproducibility in sequencing experiments. Reproducing this research using the scripts provided will also show the current level of annotation in years since 2015 when the paper was published.
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Resources

  Paper URL: https://gigascience.biomedcentral.com/articles/10.1186/s13742-015-0064-7#Sec28
  Data URL: https://github.com/gigascience/paper-alnasir2015
  Code URL: https://github.com/gigascience/paper-alnasir2015
Tags: Python SQL

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